| 1. Identity statement | |
| Reference Type | Journal Article |
| Site | plutao.sid.inpe.br |
| Holder Code | isadg {BR SPINPE} ibi 8JMKD3MGPCW/3DT298S |
| Identifier | J8LNKAN8RW/3ARNJPP |
| Repository | dpi.inpe.br/plutao/2011/11.23.19.20 (restricted access) |
| Last Update | 2012:01.30.13.06.44 (UTC) secretaria.cpa@dir.inpe.br |
| Metadata Repository | dpi.inpe.br/plutao/2011/11.23.19.20.34 |
| Metadata Last Update | 2018:06.05.00.01.38 (UTC) administrator |
| ISSN | 1413-8670 |
| Label | lattes: 0654596992211296 4 MouroKiKoMoCaPi:2011:SpExSt |
| Citation Key | MouroKiKoMoCaPi:2011:SpExSt |
| Title | Spatial exploration of Streptococcus pneumoniae clonal clustering in São Paulo, Brazil  |
| Year | 2011 |
| Month | Sept. - Oct. |
| Access Date | 2024, May 17 |
| Secondary Type | PRE PN |
| Number of Files | 1 |
| Size | 1731 KiB |
| 2. Context | |
| Author | 1 Mouro, Amilton 2 Kiffer, Carlos RV 3 Koga, Paula C. M. 4 Monteiro, Antonio Miguel Vieira 5 Camargo, Eduardo Gerbi 6 Pignatari, Antonio CC |
| Resume Identifier | 1 2 3 4 8JMKD3MGP5W/3C9JGJN |
| Group | 1 2 3 4 DPI-OBT-INPE-MCT-BR 5 DPI-OBT-INPE-MCT-BR |
| Affiliation | 1 Hosp Israelita Albert Einstein, Sao Paulo, Brazil 2 Hosp Israelita Albert Einstein, Sao Paulo, Brazil 3 Univ Fed Sao Paulo UNIFESP, Special Lab Clin Microbiol, Sao Paulo, Brazil 4 Instituto Nacional de Pesquisas Espaciais (INPE) 5 Instituto Nacional de Pesquisas Espaciais (INPE) |
| Author e-Mail Address | 1 2 3 4 miguel@dpi.inpe.br |
| e-Mail Address | miguel@dpi.inpe.br |
| Journal | Brazilian Journal of Infectious Diseases |
| Volume | 15 |
| Number | 5 |
| Pages | 462-466 |
| Secondary Mark | C_BIOTECNOLOGIA B4_CIÊNCIAS_BIOLÓGICAS_I C_CIÊNCIAS_BIOLÓGICAS_II C_CIÊNCIAS_BIOLÓGICAS_III B1_EDUCAÇÃO B1_ENFERMAGEM B2_ENGENHARIAS_II B3_FARMÁCIA B2_INTERDISCIPLINAR B3_MEDICINA_I B3_MEDICINA_II B3_MEDICINA_III B4_MEDICINA_VETERINÁRIA B3_ODONTOLOGIA B4_SAÚDE_COLETIVA |
| History (UTC) | 2011-11-24 11:03:17 :: lattes -> secretaria.cpa@dir.inpe.br :: 2011 2012-01-30 13:06:44 :: secretaria.cpa@dir.inpe.br -> administrator :: 2011 2012-07-25 15:54:51 :: administrator -> secretaria.cpa@dir.inpe.br :: 2011 2012-09-24 18:15:24 :: secretaria.cpa@dir.inpe.br -> administrator :: 2011 2018-06-05 00:01:38 :: administrator -> marciana :: 2011 |
| 3. Content and structure | |
| Is the master or a copy? | is the master |
| Content Stage | completed |
| Transferable | 1 |
| Content Type | External Contribution |
| Version Type | publisher |
| Keywords | Streptococcus pneumoniae penicillin resistance drug resistance bacterial molecular epidemiology TIME-SERIES ANALYSIS ANTIMICROBIAL RESISTANCE GENETIC RELATEDNESS ANTIBIOTIC USE EPIDEMIOLOGY INFECTIONS SPECIMENS AMERICA |
| Abstract | bjectives: To examine the spatial distribution of Streptococcus pneumoniae and its clonal patterns collected between 2002 and 2006 in Sao Paulo, Brazil. Methods: As part of an observational study in Sao Paulo city, Brazil, S. pneumoniae isolates routinely cultured from blood, respiratory specimens, or cerebrospinal and other profound fluids were selected. Additionally, only isolates with either penicillin (PEN) intermediate (I) or resistant (R) status on routine antibiogram were included, in order to obtain a higher probability of clonal isolates. A single I/R S. pneumoniae isolate per patient was included and submitted to genotypic determination by pulsed field gel electrophoresis (PFGE). Minimum inhibitory concentrations (MICs) were determined for the isolates by Etest (R) to PEN and other antimicrobials. Each isolate was geocoded in a digital map. The Kernel function and ratio methods between total isolates vs. clones were used in order to explore possible cluster formations. Results: Seventy-eight (78) S. pneumoniae community isolates from two major outpatient centers in Sao Paulo, Brazil, were selected from the databank according to their penicillin susceptibility profile, i.e. R or I to penicillin assessed by oxacillin disc diffusion. Of these, 69 were submitted to PFGE, 65 to MIC determination, and 48 to spatial analytical procedures. Preliminary spatial analysis method showed two possible cluster formation located in southwest and southeast regions of the city. Conclusion: Further analyses are required for precisely determining the existence of S. pneumoniae clusters and their related risk factors. Apparently there is a specific transmission pattern of S. pneumoniae clones within certain regions and populations. GIS and spatial methods can be applied to better understand epidemiological patterns and to identify target areas for public health interventions. |
| Area | SRE |
| Arrangement | urlib.net > BDMCI > Fonds > Produção anterior à 2021 > DIDPI > Spatial exploration of... |
| doc Directory Content | access |
| source Directory Content | there are no files |
| agreement Directory Content | there are no files |
| 4. Conditions of access and use | |
| Language | en |
| User Group | administrator lattes secretaria.cpa@dir.inpe.br |
| Reader Group | administrator secretaria.cpa@dir.inpe.br |
| Visibility | shown |
| Archiving Policy | denypublisher denyfinaldraft |
| Read Permission | deny from all and allow from 150.163 |
| Update Permission | not transferred |
| 5. Allied materials | |
| Next Higher Units | 8JMKD3MGPCW/3EQCCU5 |
| Citing Item List | sid.inpe.br/bibdigital/2013/09.09.15.05 1 |
| URL (untrusted data) | http://www.scielo.br/scielo.php?pid=S1413-86702011000500008&script=sci_arttext |
| Host Collection | dpi.inpe.br/plutao@80/2008/08.19.15.01 |
| 6. Notes | |
| Empty Fields | alternatejournal archivist callnumber copyholder copyright creatorhistory descriptionlevel dissemination doi format isbn lineage mark mirrorrepository nextedition notes orcid parameterlist parentrepositories previousedition previouslowerunit progress project rightsholder schedulinginformation secondarydate secondarykey session shorttitle sponsor subject targetfile tertiarymark tertiarytype typeofwork |
| 7. Description control | |
| e-Mail (login) | marciana |
| update | |